QuickGene Update 1.0.1
The first update after big QuickGene's release, just over a month ago, introduces some smaller changes and improvements. The most popular request was the ability to disable translation of the complement strand, which has been added as a view option. The enzyme database has also received a major overhaul, including the extensive changes to the New England Biolabs buffer recommendations and introducing the EcoRI buffer activities for all NEB enzymes.
Another useful new function is the intelligent annotation of features when opening GenBank files. You have likely encountered the problem of opening annotated GenBank files only to see all the features named "CDS" or "gene". This is common for files that have been saved or modified in programs that save the name incorrectly. QuickGene uses the correct names and, when these can't be found, deduces names from other specifications of features, attempting to provide you with the most descriptive annotations possible.
In the meantime, some bigger, research-enhancing features are approaching completion which you can expect to see next month's update. Stay tuned!
New features
- In-line search results can now easily be converted to features by double-clicking on them.
- Translation of the complement strand can now be disabled in the view options.
Changes
- Updated the enzyme database, including major changes to the NEB buffer activities and recommendations.
- Improved security and reliability when activating and updating QuickGene.
- Updating QuickGene now shows its progress.
- Improved naming of features when opening GenBank files.
- Fixed the base pair location in the status bar to update when clicking on enzyme tooltips.
- Fixed certain cases where composite features could cause problems in QGProject files.
Labels: QuickGene











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Version 0.3 boasts two big, new features and a battery of improvements. QuickGene is now faster, smaller and more stable! The first feature you may notice is the addition of in-line translations. Translations are displayed in all three frames of your sequence and, if you view the complement strand, reverse frames are shown, as well. Hovering the mouse over a line of translations highlights them, as well as the corresponding codons, providing a much clearer view. A translation manager has also been built to allow selection of alternate translation tables, easily accessed through the tools menu or by pressing F6.-746381.png)
During the past two months of testing, a number of beta testers helped point out many areas in which QuickGene could be improved, and we've been happy to comply! We're very excited about how it's developing and now the newest beta version, 0.2, is available to download.
After nearly a year of planning and development, QuickGene is finally ready to be tested in the real world and we've sent invitations to all registered beta-testers. We're all extremely excited to show off our hard work and hope you enjoy taking it for a test-drive. This phase is important in that it helps us decide which features to build first, as we have too many ideas for improvement to get them all implemented at once.



